4PV1

Cytochrome B6F structure from M. laminosus with the quinone analog inhibitor stigmatellin


Structural Similarities for the Entities in PDB 4PV1

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Dec-31-1969

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A

Description: Cytochrome b6 protein | Length: 215

No structure alignment results are available for 4PV1.A explicitly.

It is represented by chain XXXX.null which has more than 95% sequence identity.

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Entity #2 | Chains B

Description: Cytochrome b6-f complex subunit 4 protein | Length: 160

No structure alignment results are available for 4PV1.B explicitly.

It is represented by chain XXXX.null which has more than 90% sequence identity.

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Entity #3 | Chains C

Description: Apocytochrome f protein | Length: 289

No structure alignment results are available for 4PV1.C explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #4 | Chains D

Description: Cytochrome b6-f complex iron-sulfur subunit protein | Length: 179

No structure alignment results are available for 4PV1.D explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #5 | Chains E

Description: Cytochrome b6-f complex subunit 6 protein | Length: 32

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Entity #6 | Chains F

Description: Cytochrome b6-f complex subunit 7 protein | Length: 35

No structure alignment results are available for 4PV1.F explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #7 | Chains G

Description: Cytochrome b6-f complex subunit 5 protein | Length: 37

No structure alignment results are available for 4PV1.G explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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Entity #8 | Chains H

Description: Cytochrome b6-f complex subunit 8 protein | Length: 29

No structure alignment results are available for 4PV1.H explicitly.

It is represented by chain XXXX.null which has more than 70% sequence identity.

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References