Structural Similarities for the Entities in PDB 4OGQ

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A

Description: Cytochrome b6 protein | Length: 215

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Entity #2 | Chains B

Description: Cytochrome b6-f complex subunit 4 protein | Length: 160

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Entity #3 | Chains C

Description: Apocytochrome f protein | Length: 333

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Entity #4 | Chains D

Description: Cytochrome b6-f complex iron-sulfur subunit 1 protein | Length: 179

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Entity #5 | Chains E

Description: Cytochrome b6-f complex subunit 6 protein | Length: 31

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Entity #6 | Chains F

Description: Cytochrome b6-f complex subunit 7 protein | Length: 34

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Entity #7 | Chains G

Description: Cytochrome b6-f complex subunit 5 protein | Length: 37

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Entity #8 | Chains H

Description: Cytochrome b6-f complex subunit 8 protein | Length: 29

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References