Structural Similarities for the Entities in PDB 4GLV

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,C,E,G

Description: Lysozyme C protein | Length: 129

No structure alignment results are available for 4GLV.A, 4GLV.C, 4GLV.E, 4GLV.G explicitly.

These chains are represented by chain 2VB1.a which is 100% sequence identical.

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Entity #2 | Chains B,D,F,H

Description: OBody AM3L09 protein | Length: 107

No structure alignment results are available for 4GLV.B, 4GLV.D, 4GLV.F, 4GLV.H explicitly.

These chains are represented by chain 4GN4.B which has more than 90% sequence identity.

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References