Structural Similarities for the Entities in PDB 4CR4

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains 1

Description: PROTEASOME COMPONENT PRE3 protein | Length: 215

No structure alignment results are available for 4CR4.1 explicitly.

It is represented by chain 4R17.N which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.1 compares with the representative chain PDP:4R17Na. Select a comparison method:


Entity #10 | Chains C

Description: PROTEASOME COMPONENT Y13 protein | Length: 258

No structure alignment results are available for 4CR4.C explicitly.

It is represented by chain XXXX.null which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.C compares with the representative chain xxxx. Select a comparison method:


Entity #11 | Chains D

Description: PROTEASOME COMPONENT PRE6 protein | Length: 254

No structure alignment results are available for 4CR4.D explicitly.

It is represented by chain XXXX.null which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.D compares with the representative chain xxxx. Select a comparison method:


Entity #12 | Chains E

Description: PROTEASOME COMPONENT PUP2 protein | Length: 260

No structure alignment results are available for 4CR4.E explicitly.

It is represented by chain XXXX.null which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.E compares with the representative chain xxxx. Select a comparison method:


Entity #13 | Chains F

Description: PROTEASOME COMPONENT PRE5 protein | Length: 234

No structure alignment results are available for 4CR4.F explicitly.

It is represented by chain 4R17.E which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.F compares with the representative chain PDP:4R17Ea. Select a comparison method:


Entity #14 | Chains G

Description: PROTEASOME COMPONENT C1 protein | Length: 288

No structure alignment results are available for 4CR4.G explicitly.

It is represented by chain 4R17.F which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.G compares with the representative chain PDP:4R17Fa. Select a comparison method:


Entity #15 | Chains H

Description: 26S PROTEASE REGULATORY SUBUNIT 7 HOMOLOG protein | Length: 467

No structure alignment results are available for 4CR4.H explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.H compares with the representative chain xxxx. Select a comparison method:


Entity #16 | Chains I

Description: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG protein | Length: 437

No structure alignment results are available for 4CR4.I explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.I compares with the representative chain xxxx. Select a comparison method:


Entity #17 | Chains J

Description: 26S PROTEASE REGULATORY SUBUNIT 8 HOMOLOG protein | Length: 405

No structure alignment results are available for 4CR4.J explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.J compares with the representative chain xxxx. Select a comparison method:


Entity #18 | Chains K

Description: 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG protein | Length: 428

No structure alignment results are available for 4CR4.K explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.K compares with the representative chain xxxx. Select a comparison method:


Entity #19 | Chains L

Description: 26S PROTEASE SUBUNIT RPT4 protein | Length: 437

No structure alignment results are available for 4CR4.L explicitly.

It is represented by chain XXXX.null which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.L compares with the representative chain xxxx. Select a comparison method:


Entity #2 | Chains 2

Description: PROTEASOME COMPONENT PUP1 protein | Length: 261

No structure alignment results are available for 4CR4.2 explicitly.

It is represented by chain 5LE5.H which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.2 compares with the representative chain PDP:5LE5Ha. Select a comparison method:


Entity #20 | Chains M

Description: 26S PROTEASE REGULATORY SUBUNIT 6A protein | Length: 434

No structure alignment results are available for 4CR4.M explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.M compares with the representative chain xxxx. Select a comparison method:


Entity #21 | Chains N

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN2 protein | Length: 945

No structure alignment results are available for 4CR4.N explicitly.

It is represented by chain 4ADY.A which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.N compares with the representative chain PDP:4ADYAa. Select a comparison method:


Entity #22 | Chains O

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN9 protein | Length: 393

No structure alignment results are available for 4CR4.O explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.O compares with the representative chain xxxx. Select a comparison method:


Entity #23 | Chains P

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN5 protein | Length: 445

No structure alignment results are available for 4CR4.P explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.P compares with the representative chain xxxx. Select a comparison method:


Entity #24 | Chains Q

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN6 protein | Length: 434

No structure alignment results are available for 4CR4.Q explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.Q compares with the representative chain xxxx. Select a comparison method:


Entity #25 | Chains R

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN7 protein | Length: 429

No structure alignment results are available for 4CR4.R explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.R compares with the representative chain xxxx. Select a comparison method:


Entity #26 | Chains S

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN3 protein | Length: 523

No structure alignment results are available for 4CR4.S explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.S compares with the representative chain xxxx. Select a comparison method:


Entity #27 | Chains T

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN12 protein | Length: 274

No structure alignment results are available for 4CR4.T explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.T compares with the representative chain xxxx. Select a comparison method:


Entity #28 | Chains U

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN8 protein | Length: 338

No structure alignment results are available for 4CR4.U explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.U compares with the representative chain xxxx. Select a comparison method:


Entity #29 | Chains V

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN11 protein | Length: 306

No structure alignment results are available for 4CR4.V explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.V compares with the representative chain xxxx. Select a comparison method:


Entity #3 | Chains 3

Description: PROTEASOME COMPONENT PUP3 protein | Length: 205

No structure alignment results are available for 4CR4.3 explicitly.

It is represented by chain 5LE5.I which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.3 compares with the representative chain PDP:5LE5Ia. Select a comparison method:


Entity #30 | Chains W

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN10 protein | Length: 268

No structure alignment results are available for 4CR4.W explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.W compares with the representative chain xxxx. Select a comparison method:


Entity #31 | Chains X

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN13 protein | Length: 156

No structure alignment results are available for 4CR4.X explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.X compares with the representative chain xxxx. Select a comparison method:


Entity #32 | Chains Y

Description: 26S PROTEASOME COMPLEX SUBUNIT SEM1 protein | Length: 89

No structure alignment results are available for 4CR4.Y explicitly.

It is represented by chain 5UBP.C which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.Y compares with the representative chain PDP:5UBPC_. Select a comparison method:


Entity #33 | Chains Z

Description: 26S PROTEASOME REGULATORY SUBUNIT RPN1 protein | Length: 993

No structure alignment results are available for 4CR4.Z explicitly.

It is represented by chain XXXX.null which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.Z compares with the representative chain xxxx. Select a comparison method:


Entity #4 | Chains 4

Description: PROTEASOME COMPONENT C11 protein | Length: 198

No structure alignment results are available for 4CR4.4 explicitly.

It is represented by chain 5LE5.J which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.4 compares with the representative chain PDP:5LE5Ja. Select a comparison method:


Entity #5 | Chains 5

Description: PROTEASOME COMPONENT PRE2 protein | Length: 287

No structure alignment results are available for 4CR4.5 explicitly.

It is represented by chain 4X6Z.L which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.5 compares with the representative chain PDP:4X6ZLa. Select a comparison method:


Entity #6 | Chains 6

Description: PROTEASOME COMPONENT C5 protein | Length: 241

No structure alignment results are available for 4CR4.6 explicitly.

It is represented by chain 4R17.L which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.6 compares with the representative chain PDP:4R17La. Select a comparison method:


Entity #7 | Chains 7

Description: PROTEASOME COMPONENT PRE4 protein | Length: 266

No structure alignment results are available for 4CR4.7 explicitly.

It is represented by chain 4R17.M which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 4CR4.7 compares with the representative chain PDP:4R17Ma. Select a comparison method:


Entity #8 | Chains A

Description: PROTEASOME COMPONENT C7-ALPHA protein | Length: 252

No structure alignment results are available for 4CR4.A explicitly.

It is represented by chain 5LE5.G which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.A compares with the representative chain PDP:5LE5Ga. Select a comparison method:


Entity #9 | Chains B

Description: PROTEASOME COMPONENT Y7 protein | Length: 250

No structure alignment results are available for 4CR4.B explicitly.

It is represented by chain 5LE5.A which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 4CR4.B compares with the representative chain PDP:5LE5Aa. Select a comparison method:


References