Structural Similarities for the Entities in PDB 3UNE

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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Entity #1 | Chains A,O,c,q

Description: Proteasome subunit alpha type-2 protein | Length: 234

No structure alignment results are available for 3UNE.A, 3UNE.O, 3UNE.c, 3UNE.q explicitly.

These chains are represented by chain 5LE5.A which has more than 95% sequence identity.

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Entity #10 | Chains J,X,l,z

Description: Proteasome subunit beta type-2 protein | Length: 201

No structure alignment results are available for 3UNE.J, 3UNE.X, 3UNE.l, 3UNE.z explicitly.

These chains are represented by chain 5LE5.J which has more than 95% sequence identity.

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Entity #11 | Chains 1,K,Y,m

Description: Proteasome subunit beta type-5 protein | Length: 205

No structure alignment results are available for 3UNE.1, 3UNE.K, 3UNE.Y, 3UNE.m explicitly.

These chains are represented by chain 5LE5.K which has more than 95% sequence identity.

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Entity #12 | Chains 2,L,Z,n

Description: Proteasome subunit beta type-1 protein | Length: 213

No structure alignment results are available for 3UNE.2, 3UNE.L, 3UNE.Z, 3UNE.n explicitly.

These chains are represented by chain 5LE5.L which has more than 95% sequence identity.

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Entity #13 | Chains 3,M,a,o

Description: Proteasome subunit beta type-4 protein | Length: 219

No structure alignment results are available for 3UNE.3, 3UNE.M, 3UNE.a, 3UNE.o explicitly.

These chains are represented by chain 5LE5.M which has more than 95% sequence identity.

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Entity #14 | Chains 4,N,b,p

Description: Proteasome subunit beta type-6 protein | Length: 205

No structure alignment results are available for 3UNE.4, 3UNE.N, 3UNE.b, 3UNE.p explicitly.

These chains are represented by chain 5LE5.N which has more than 95% sequence identity.

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Entity #2 | Chains B,P,d,r

Description: Proteasome subunit alpha type-4 protein | Length: 261

No structure alignment results are available for 3UNE.B, 3UNE.P, 3UNE.d, 3UNE.r explicitly.

These chains are represented by chain XXXX.null which has more than 95% sequence identity.

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Entity #3 | Chains C,Q,e,s

Description: Proteasome subunit alpha type-7 protein | Length: 248

No structure alignment results are available for 3UNE.C, 3UNE.Q, 3UNE.e, 3UNE.s explicitly.

These chains are represented by chain XXXX.null which has more than 95% sequence identity.

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Entity #4 | Chains D,R,f,t

Description: Proteasome subunit alpha type-5 protein | Length: 241

No structure alignment results are available for 3UNE.D, 3UNE.R, 3UNE.f, 3UNE.t explicitly.

These chains are represented by chain XXXX.null which is 100% sequence identical.

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Entity #5 | Chains E,S,g,u

Description: Proteasome subunit alpha type-1 protein | Length: 263

No structure alignment results are available for 3UNE.E, 3UNE.S, 3UNE.g, 3UNE.u explicitly.

These chains are represented by chain 5LE5.E which has more than 95% sequence identity.

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Entity #6 | Chains F,T,h,v

Description: Proteasome subunit alpha type-3 protein | Length: 255

No structure alignment results are available for 3UNE.F, 3UNE.T, 3UNE.h, 3UNE.v explicitly.

These chains are represented by chain 5LE5.F which has more than 95% sequence identity.

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Entity #7 | Chains G,U,i,w

Description: Proteasome subunit alpha type-6 protein | Length: 246

No structure alignment results are available for 3UNE.G, 3UNE.U, 3UNE.i, 3UNE.w explicitly.

These chains are represented by chain 5LE5.G which has more than 95% sequence identity.

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Entity #8 | Chains H,V,j,x

Description: Proteasome subunit beta type-7 protein | Length: 234

No structure alignment results are available for 3UNE.H, 3UNE.V, 3UNE.j, 3UNE.x explicitly.

These chains are represented by chain 5LE5.H which has more than 95% sequence identity.

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Entity #9 | Chains I,W,k,y

Description: Proteasome subunit beta type-3 protein | Length: 205

No structure alignment results are available for 3UNE.I, 3UNE.W, 3UNE.k, 3UNE.y explicitly.

These chains are represented by chain 5LE5.I which has more than 95% sequence identity.

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References