Structural Similarities for the Entities in PDB 3PUY

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains E

Description: Maltose transporter subunit; periplasmic-binding component of ABC superfamily protein | Length: 378

No structure alignment results are available for 3PUY.E explicitly.

It is represented by chain 4EXK.A which has more than 70% sequence identity.

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Entity #2 | Chains F

Description: Maltose transporter subunit; membrane component of ABC superfamily protein | Length: 514

No structure alignment results are available for 3PUY.F explicitly.

It is represented by chain 3RLF.F which is 100% sequence identical.

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Entity #3 | Chains G

Description: Maltose transporter subunit; membrane component of ABC superfamily protein | Length: 296

No structure alignment results are available for 3PUY.G explicitly.

It is represented by chain 3RLF.G which is 100% sequence identical.

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Entity #4 | Chains A,B

Description: Fused maltose transport subunit, ATP-binding component of ABC superfamily; regulatory protein protein | Length: 381

No structure alignment results are available for 3PUY.A, 3PUY.B explicitly.

These chains are represented by chain 1OXX.k which has more than 40% sequence identity.

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References