Structural Similarities for the Entities in PDB 3GVP

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B,C,D

Description: Adenosylhomocysteinase 3 protein | Length: 435

No structure alignment results are available for 3GVP.A, 3GVP.B, 3GVP.C, 3GVP.D explicitly.

These chains are represented by chain 3OND.A which has more than 40% sequence identity.

Show structure comparison results


View how chain 3GVP.D compares with the representative chain PDP:3ONDAa. Select a comparison method: