Structural Similarities for the Entities in PDB 3FH6

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains F,H

Description: Maltose transport system permease protein malF protein | Length: 480

No structure alignment results are available for 3FH6.F, 3FH6.H explicitly.

These chains are represented by chain 3RLF.F which is 100% sequence identical.

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Entity #2 | Chains G,I

Description: Maltose transport system permease protein malG protein | Length: 296

No structure alignment results are available for 3FH6.G, 3FH6.I explicitly.

These chains are represented by chain 3RLF.G which is 100% sequence identical.

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Entity #3 | Chains A,B,C,D

Description: Maltose/maltodextrin import ATP-binding protein malK protein | Length: 381

No structure alignment results are available for 3FH6.A, 3FH6.B, 3FH6.C, 3FH6.D explicitly.

These chains are represented by chain 1OXX.k which has more than 40% sequence identity.

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References