Structural Similarities for the Entities in PDB 3E8E

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,B,E,I,L,P

Description: cAMP-dependent protein kinase catalytic subunit alpha protein | Length: 350

No structure alignment results are available for 3E8E.A, 3E8E.B, 3E8E.E, 3E8E.I, 3E8E.L, 3E8E.P explicitly.

These chains are represented by chain XXXX.null which has more than 95% sequence identity.

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Entity #2 | Chains C,F,G,J,N,Q

Description: PKI inhibitor peptide protein | Length: 20

No structure alignment results are available for 3E8E.C, 3E8E.F, 3E8E.G, 3E8E.J, 3E8E.N, 3E8E.Q explicitly.

These chains are represented by chain 1RDQ.I which is 100% sequence identical.

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References