Structural Similarities for the Entities in PDB 2X17

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains 0,1,2,3,4,5,6,7,8,9,G,H,I,J,K,L,M,N,O,P,Q,R,Y,Z

Description: PUTATIVE FERRITIN HOMOLOG protein | Length: 173

No structure alignment results are available for 2X17.0, 2X17.1, 2X17.2, 2X17.3, 2X17.4, 2X17.5, 2X17.6, 2X17.7, 2X17.8, 2X17.9, 2X17.G, 2X17.H, 2X17.I, 2X17.J, 2X17.K, 2X17.L, 2X17.M, 2X17.N, 2X17.O, 2X17.P, 2X17.Q, 2X17.R, 2X17.Y, 2X17.Z explicitly.

These chains are represented by chain 1VLG.a which has more than 50% sequence identity.

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References