Structural Similarities for the Entities in PDB 2V86

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B

Description: VDJ RECOMBINATION-ACTIVATING PROTEIN 2 protein | Length: 82

No structure alignment results are available for 2V86.A, 2V86.B explicitly.

These chains are represented by chain 2V89.a which is 100% sequence identical.

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View how chain 2V86.B compares with the representative chain d2v89a1. Select a comparison method:


Entity #2 | Chains D,E

Description: H3R2ME2AK4ME3 PEPTIDE protein | Length: 9

This entity is too short to be considered for the all vs. all structure alignments.


References