Structural Similarities for the Entities in PDB 2CNK

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A

Description: CASPASE-3 P17 SUBUNIT protein | Length: 147

No structure alignment results are available for 2CNK.A explicitly.

It is represented by chain 2DKO.A which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 2CNK.A compares with the representative chain PDP:2DKOAa. Select a comparison method:


Entity #2 | Chains B

Description: CASPASE-3 P12 SUBUNIT protein | Length: 103

No structure alignment results are available for 2CNK.B explicitly.

It is represented by chain 2DKO.B which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 2CNK.B compares with the representative chain PDP:2DKOBa. Select a comparison method:


Entity #3 | Chains I

Description: AZA-PEPTIDE EXPOXIDE protein | Length: 5

This entity is too short to be considered for the all vs. all structure alignments.


References