Structural Similarities for the Entities in PDB 2C35

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,C,E,G

Description: DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE protein | Length: 152

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Entity #2 | Chains B,D,F,H

Description: DNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDE protein | Length: 172

No structure alignment results are available for 2C35.B, 2C35.D, 2C35.F, 2C35.H explicitly.

These chains are represented by chain 1Y14.b which has more than 50% sequence identity.

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View how chain 2C35.H compares with the representative chain d1y14b1. Select a comparison method:


References