Structural Similarities for the Entities in PDB 2A06

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,N

Description: Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial protein | Length: 446

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Entity #10 | Chains J,W

Description: Ubiquinol-cytochrome c reductase complex 7.2 kDa protein protein | Length: 62

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Entity #2 | Chains B,O

Description: Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial protein | Length: 439

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Entity #3 | Chains C,P

Description: Cytochrome b, heme protein, mitochondrial protein | Length: 379

No structure alignment results are available for 2A06.C, 2A06.P explicitly.

These chains are represented by chain 3CX5.c which has more than 50% sequence identity.

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View how chain 2A06.P compares with the representative chain d3cx5c1. Select a comparison method:


Entity #4 | Chains D,Q

Description: Cytochrome c1, heme protein, mitochondrial protein | Length: 241

No structure alignment results are available for 2A06.D, 2A06.Q explicitly.

These chains are represented by chain 3CX5.d which has more than 50% sequence identity.

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Entity #5 | Chains E,R

Description: Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial protein | Length: 196

No structure alignment results are available for 2A06.E, 2A06.R explicitly.

These chains are represented by chain 3CX5.e which has more than 50% sequence identity.

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Entity #6 | Chains F,S

Description: Ubiquinol-cytochrome c reductase complex 14 kDa protein protein | Length: 110

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Entity #7 | Chains G,T

Description: Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C protein | Length: 81

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Entity #8 | Chains H,U

Description: Ubiquinol-cytochrome c reductase complex 11 kDa protein protein | Length: 78

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Entity #9 | Chains I,V

Description: Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial protein | Length: 78

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References