Structural Similarities for the Entities in PDB 1XI5

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I

Description: Clathrin heavy chain protein | Length: 1630

No structure alignment results are available for 1XI5.A, 1XI5.B, 1XI5.C, 1XI5.D, 1XI5.E, 1XI5.F, 1XI5.G, 1XI5.H, 1XI5.I explicitly.

These chains are represented by chain 3IYV.A which is 100% sequence identical.

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View how chain 1XI5.I compares with the representative chain PDP:3IYVAa. Select a comparison method:


Entity #2 | Chains J,K,L,M,N,O,P,Q,R

Description: Auxilin J-domain protein | Length: 114

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References