Structural Similarities for the Entities in PDB 1SFC

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,E,I

Description: PROTEIN (SYNAPTOBREVIN 2) protein | Length: 96

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Entity #2 | Chains B,F,J

Description: PROTEIN (SYNTAXIN 1A) protein | Length: 83

No structure alignment results are available for 1SFC.B, 1SFC.F, 1SFC.J explicitly.

These chains are represented by chain 1N7S.b which has more than 70% sequence identity.

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View how chain 1SFC.J compares with the representative chain d1n7sb_. Select a comparison method:


Entity #3 | Chains C,G,K

Description: PROTEIN (SNAP-25B) protein | Length: 83

No structure alignment results are available for 1SFC.C, 1SFC.G, 1SFC.K explicitly.

These chains are represented by chain 1N7S.c which is 100% sequence identical.

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View how chain 1SFC.K compares with the representative chain d1n7sc_. Select a comparison method:


Entity #4 | Chains D,H,L

Description: PROTEIN (SNAP-25B) protein | Length: 87

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References