Structural Similarities for the Entities in PDB 1K8K

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A

Description: ACTIN-LIKE PROTEIN 3 protein | Length: 418


Entity #2 | Chains B

Description: ACTIN-LIKE PROTEIN 2 protein | Length: 394

No structure alignment results are available for 1K8K.B explicitly.

It is represented by chain XXXX.null which has more than 40% sequence identity.

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View how chain 1K8K.B compares with the representative chain xxxx. Select a comparison method:

Entity #3 | Chains C

Description: ARP2/3 COMPLEX 41 KDA SUBUNIT protein | Length: 372


Entity #4 | Chains D

Description: ARP2/3 COMPLEX 34 KDA SUBUNIT protein | Length: 300


Entity #5 | Chains E

Description: ARP2/3 COMPLEX 21 KDA SUBUNIT protein | Length: 178


Entity #6 | Chains F

Description: ARP2/3 COMPLEX 20 KDA SUBUNIT protein | Length: 168


Entity #7 | Chains G

Description: ARP2/3 COMPLEX 16 KDA SUBUNIT protein | Length: 151