Sequence Similarity Clusters for the Entities in PDB 6S0O

Entity #1 | Chains: A,D,E
Two-domain laccase protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 8866
95 % 1 10 593 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 1 10 620
70 % 2 22 457
50 % 3 29 444
40 % 3 29 464
30 % 3 29 483
Entity #2 | Chains: B,C,F
Two-domain laccase protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32569
95 % 1 1 27334 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 13 1804
70 % 1 5 6335
50 % 4 29 444
40 % 4 29 464
30 % 4 29 483

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures