Sequence Similarity Clusters for the Entities in PDB 6RMG

Entity #1 | Chains: A
Protein patched homolog 1,GFP-like fluorescent chromoprotein FP506, related protein, length: 1471 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 81569
95 % 1 1 43956
90 % 1 1 41810
70 % 2 11 3863
50 % 2 11 3726
40 % 2 11 3891
30 % 2 11 3760
Entity #2 | Chains: B
Sonic hedgehog protein protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58874
95 % 1 1 53572
90 % 1 1 50630
70 % 1 1 36952
50 % 1 1 32012
40 % 1 1 34606
30 % 1 1 28983

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures