Sequence Similarity Clusters for the Entities in PDB 6Q0J

Entity #1 | Chains: A,B
Serine/threonine-protein kinase B-raf protein, length: 805 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26809
95 % 3 5 9392
90 % 3 5 9304
70 % 3 5 9042
50 % 3 5 8408
40 % 3 5 8086
30 % 3 5 7565
Entity #2 | Chains: C,D
Dual specificity mitogen-activated protein kinase kinase 1 protein, length: 415 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27270
95 % 6 7 11410
90 % 6 7 11239
70 % 13 14 5046
50 % 13 14 4892
40 % 13 14 4769
30 % 13 14 4631
Entity #3 | Chains: X,Y
14-3-3 protein zeta protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 11581
95 % 3 4 10981
90 % 3 4 11241
70 % 89 91 175
50 % 205 207 109
40 % 205 207 131
30 % 205 207 138

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3EQC 1 A Dual specificity mitogen-activated protein kinase kinase 1 Protein kinase domain, UNP residues 35-393 9606 2.7.12.2 | Details
2 3EQI 1 A Dual specificity mitogen-activated protein kinase kinase 1 Protein kinase domain, UNP residues 35-393 9606 2.7.12.2 | Details
3 3EQH 1 A Dual specificity mitogen-activated protein kinase kinase 1 Protein kinase domain, UNP residues 35-393 9606 2.7.12.2 | Details
4 3EQD 1 A Dual specificity mitogen-activated protein kinase kinase 1 Protein kinase domain, UNP residues 35-393 9606 2.7.12.2 | Details
5 3EQG 1 A Dual specificity mitogen-activated protein kinase kinase 1 Protein kinase domain, UNP residues 35-393 9606 2.7.12.2 | Details
6 6PP9 2 B Dual specificity mitogen-activated protein kinase kinase 1 9606 2.7.12.2 | Details
7 5EYM 1 A, B Dual specificity mitogen-activated protein kinase kinase 1 UNP residues 35-393 9606 2.7.12.2 | Details
8 6U2G 1 A Dual specificity mitogen-activated protein kinase kinase 1 9606 2.7.12.2 | Details
9 2Y4I 2 C DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1 9986 2.7.12.2 | Details
10 3EQF 1 A Dual specificity mitogen-activated protein kinase kinase 1 Protein kinase domain, UNP residues 35-393 9606 2.7.12.2 | Details
11 5KKR 2 C Dual specificity mitogen-activated protein kinase kinase 1 9986 2.7.12.2 | Details
12 6Q0T 2 C Dual specificity mitogen-activated protein kinase kinase 1 9606 2.7.12.2 | Details
13 6Q0J 2 C, D Dual specificity mitogen-activated protein kinase kinase 1 9606 2.7.12.2 | Details
14 6NYB 2 B Dual specificity mitogen-activated protein kinase kinase 1 GDC-0623 9606 2.7.12.2 | Details