Sequence Similarity Clusters for the Entities in PDB 6PWE

Entity #1 | Chains: A,E
Histone H3 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 26 1021
95 % 185 250 42
90 % 191 258 41
70 % 194 261 51
50 % 203 271 79
40 % 203 271 96
30 % 203 271 96
Entity #2 | Chains: B,F
Histone H4 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 5518
95 % 203 275 33
90 % 210 284 35
70 % 211 283 46
50 % 211 283 76
40 % 211 283 94
30 % 211 283 93
Entity #3 | Chains: C,G
Histone H2A protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6541
95 % 4 6 7097
90 % 4 6 7645
70 % 182 253 55
50 % 189 260 86
40 % 189 260 101
30 % 189 260 102
Entity #4 | Chains: D,H
Histone H2B protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 7802
95 % 4 6 7046
90 % 4 6 7644
70 % 189 259 53
50 % 194 266 83
40 % 194 266 100
30 % 194 266 101
Entity #5 | Chains: I
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #6 | Chains: J
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2NQB 4 C, G Histone H2A 7227
2 2PYO 5 C, G Histone H2A 7227
3 4QLC 5 C, G Histone H2A 7227
4 6PWE 3 C, G Histone H2A 7227
5 6PWF 3 C, G Histone H2A 7227
6 6DZT 3 C, G Histone H2A 7227