Sequence Similarity Clusters for the Entities in PDB 6PWE

Entity #1 | Chains: A,E
Histone H3 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 26 1019
95 % 185 250 42
90 % 191 258 43
70 % 194 261 51
50 % 203 271 79
40 % 203 271 95
30 % 203 271 95
Entity #2 | Chains: B,F
Histone H4 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 5510
95 % 203 275 34
90 % 210 284 36
70 % 211 283 46
50 % 211 283 76
40 % 211 283 92
30 % 211 283 92
Entity #3 | Chains: C,G
Histone H2A protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6002
95 % 4 6 7436
90 % 4 6 7413
70 % 182 253 54
50 % 189 260 85
40 % 189 260 100
30 % 189 260 100
Entity #4 | Chains: D,H
Histone H2B protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 8080
95 % 4 6 7693
90 % 4 6 7665
70 % 189 259 53
50 % 194 266 82
40 % 194 266 99
30 % 194 266 99
Entity #5 | Chains: I
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #6 | Chains: J
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2NQB 4 C, G Histone H2A 7227
2 2PYO 5 C, G Histone H2A 7227
3 4QLC 5 C, G Histone H2A 7227
4 6PWE 3 C, G Histone H2A 7227
5 6PWF 3 C, G Histone H2A 7227
6 6DZT 3 C, G Histone H2A 7227