Sequence Similarity Clusters for the Entities in PDB 6PWE

Entity #1 | Chains: A,E
Histone H3 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 18 26 1022
95 % 183 248 46
90 % 189 256 42
70 % 192 259 52
50 % 201 269 81
40 % 201 269 99
30 % 201 269 98
Entity #2 | Chains: B,F
Histone H4 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 7 5476
95 % 201 273 33
90 % 208 282 36
70 % 209 281 46
50 % 209 281 78
40 % 209 281 96
30 % 209 281 94
Entity #3 | Chains: C,G
Histone H2A protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 5933
95 % 4 6 6920
90 % 4 6 6930
70 % 180 251 58
50 % 187 258 88
40 % 187 258 104
30 % 187 258 104
Entity #4 | Chains: D,H
Histone H2B protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 8503
95 % 4 6 7623
90 % 4 6 7584
70 % 186 256 54
50 % 186 256 90
40 % 186 256 106
30 % 186 256 107
Entity #5 | Chains: I
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #6 | Chains: J
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures