Sequence Similarity Clusters for the Entities in PDB 6OZR

Entity #1 | Chains: A,B
Endonuclease V protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 3438
95 % 4 11 3685 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 4 11 3762
70 % 5 13 3415
50 % 5 13 3373
40 % 5 13 3365
30 % 5 15 2536
Entity #2 | Chains: C,D
DNA/RNA (23-MER) hybrid, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures