Sequence Similarity Clusters for the Entities in PDB 6NHV

Entity #1 | Chains: A
superfolder GFP protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 77987
95 % 283 288 70
90 % 329 334 36
70 % 334 340 41
50 % 335 341 76
40 % 336 342 89
30 % 336 342 91
Entity #2 | Chains: N,O,X
DARP14 - Subunit B protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 1090
95 % 3 6 1480
90 % 3 6 1503
70 % 3 6 1549
50 % 3 6 1565
40 % 3 6 1620
30 % 3 6 1642
Entity #3 | Chains: R,S,T
Subunit A-DARPin protein, length: 319 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 4692
95 % 1 2 5528
90 % 1 3 2761
70 % 1 3 2811
50 % 1 3 2809
40 % 1 3 2818
30 % 1 3 2790

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures