Sequence Similarity Clusters for the Entities in PDB 6NBC

Entity #1 | Chains: A,C
Hemoglobin subunit alpha protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 208 218 43
95 % 244 255 39
90 % 245 256 44
70 % 325 339 22
50 % 704 733 7
40 % 704 733 7
30 % 752 781 10
Entity #2 | Chains: B,D
Hemoglobin subunit beta protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 156 165 80
95 % 246 256 36
90 % 251 261 37
70 % 335 349 18
50 % 705 733 7
40 % 705 733 7
30 % 753 781 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures