Sequence Similarity Clusters for the Entities in PDB 6N6D

Entity #1 | Chains: A
Oligoribonuclease protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 12986
95 % 2 7 12843 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 7 12680
70 % 2 7 12003
50 % 5 27 1359
40 % 5 27 1410
30 % 5 27 1438
Entity #2 | Chains: D
RNA (5'-R(P*AP*G)-3') rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6N6A 1 A Oligoribonuclease 666 3.1 | Details
2 6N6D 1 A Oligoribonuclease 666 3.1 | Details
3 6N6E 1 A RNA exonuclease 2 homolog,Small fragment nuclease 666 3.1 | Details
4 6N6C 1 A RNA exonuclease 2 homolog,Small fragment nuclease 666 3.1 | Details
5 6N6F 1 A Oligoribonuclease 666 3.1 | Details
6 6N6H 1 A Oligoribonuclease 666 3.1 | Details
7 6N6G 1 A Oligoribonuclease 666 3.1 | Details