Sequence Similarity Clusters for the Entities in PDB 6N6D

Entity #1 | Chains: A
Oligoribonuclease protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 12772
95 % 2 7 12648 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 2 7 12600
70 % 2 7 11422
50 % 2 18 2206
40 % 2 18 2237
30 % 2 18 2250
Entity #2 | Chains: D
RNA (5'-R(P*AP*G)-3') rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures