Sequence Similarity Clusters for the Entities in PDB 6MT6

Entity #1 | Chains: A
HLA class I histocompatibility antigen, B-37 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 28636
95 % 4 127 304 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.9
PDBFlex
90 % 6 241 148
70 % 10 833 6
50 % 10 847 7
40 % 11 893 8
30 % 11 918 13
Entity #2 | Chains: B
NP388 peptide protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 728 2
95 % 11 777 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 11 795 4
70 % 13 1099 4
50 % 14 1123 3
40 % 14 1123 3
30 % 14 1123 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures