Sequence Similarity Clusters for the Entities in PDB 6MM8

Entity #1 | Chains: C
cAMP-dependent protein kinase catalytic subunit alpha protein, length: 339 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 65 586
95 % 108 292 120 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 1.0
PDBFlex
90 % 109 295 124
70 % 109 295 135
50 % 109 295 160
40 % 109 295 173
30 % 109 296 176
Entity #2 | Chains: D
Ryanodine receptor 2 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 35704
95 % 2 4 13053 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 1.8
PDBFlex
90 % 2 4 12666
70 % 2 4 12043
50 % 4 10 6038
40 % 5 12 5165
30 % 5 12 4953

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures