Sequence Similarity Clusters for the Entities in PDB 6MD4

Entity #1 | Chains: A,B
Peroxisome proliferator-activated receptor gamma protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 71 131 141
95 % 124 206 109 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 124 206 114
70 % 97 163 164
50 % 138 224 125
40 % 138 224 145
30 % 499 712 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures