Sequence Similarity Clusters for the Entities in PDB 6K0Y

Entity #1 | Chains: A
Antibody Heavy Chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68678
95 % 1 1 54920
90 % 1 1 51874
70 % 179 3058 1
50 % 375 6427 1
40 % 375 6428 1
30 % 381 6475 1
Entity #2 | Chains: B
Antibody Light Chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68677
95 % 1 2 27895
90 % 25 573 4
70 % 145 2488 2
50 % 376 6427 1
40 % 376 6428 1
30 % 382 6475 1
Entity #3 | Chains: C
Programmed cell death protein 1 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19776
95 % 1 5 9674
90 % 3 7 8067
70 % 4 17 3010
50 % 4 18 2697
40 % 4 18 2723
30 % 4 18 2711

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures