Sequence Similarity Clusters for the Entities in PDB 6J2P

Entity #1 | Chains: A,B,C,D
COMPASS component SPP1 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25187
95 % 1 1 22743 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 1 1 22153
70 % 1 1 22512
50 % 1 1 19832
40 % 1 1 18183
30 % 1 1 16322
Entity #2 | Chains: E,F,G,H
Histone H3 protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures