Sequence Similarity Clusters for the Entities in PDB 6IY3

Entity #1 | Chains: A,E
Histone H3 protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21257
95 % 17 21 1632
90 % 17 21 1662
70 % 22 27 1340
50 % 23 28 1352
40 % 23 28 1405
30 % 23 28 1435
Entity #2 | Chains: B,F
Histone H4 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 24 1330
95 % 25 29 1369
90 % 27 31 1311
70 % 27 33 1271
50 % 27 33 1311
40 % 27 33 1352
30 % 27 33 1385
Entity #3 | Chains: C,G
Histone H2A protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 111 130 110
95 % 218 257 38
90 % 21 26 1188
70 % 23 28 1199
50 % 25 30 1131
40 % 25 30 1157
30 % 25 30 1199
Entity #4 | Chains: D,H
Histone H2B protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 19 1405
95 % 19 23 1329
90 % 26 32 920
70 % 29 35 878
50 % 29 35 912
40 % 29 35 942
30 % 29 35 985
Entity #5 | Chains: J
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #6 | Chains: I
DNA (147-MER) dna, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #7 | Chains: O
Transcription regulatory protein SNF2 protein, length: 679 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 9 9074
95 % 2 9 9779
90 % 2 9 9715
70 % 2 9 9415
50 % 3 10 7987
40 % 3 10 7701
30 % 3 10 6862

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures