6HX8

Tubulin-STX3451 complex


Sequence Similarity Clusters for the Entities in PDB 6HX8

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 66 168 43
95 % 66 262 13 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 66 265 16
70 % 66 281 13
50 % 66 281 19
40 % 131 562 4
30 % 132 573 8
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 57 112 171
95 % 65 260 14 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 66 273 8
70 % 66 281 12
50 % 66 281 18
40 % 132 562 4
30 % 133 573 8
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 52 104 415
95 % 55 118 457 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 55 118 486
70 % 55 118 520
50 % 55 118 549
40 % 55 118 590
30 % 55 118 609
Entity #4 | Chains: F
Tubulin-Tyrosine Ligase protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 53 104 416
95 % 53 104 551 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 0.8
PDBFlex
90 % 53 104 577
70 % 53 107 576
50 % 53 107 621
40 % 53 107 654
30 % 53 107 673

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures