Sequence Similarity Clusters for the Entities in PDB 6GNX

Entity #1 | Chains: A,C
Membrane-anchored junction protein protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12182
95 % 3 3 11997 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 3 3 11875
70 % 3 3 11311
50 % 3 3 10370
40 % 3 3 9764
30 % 3 3 9019
Entity #2 | Chains: B,D
Telomere repeats-binding bouquet formation protein 2 protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39468
95 % 1 1 31700 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 30458
70 % 1 1 27465
50 % 1 1 24060
40 % 1 1 21931
30 % 1 1 19568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures