Sequence Similarity Clusters for the Entities in PDB 6FS0

Entity #1 | Chains: A
Induced myeloid leukemia cell differentiation protein Mcl-1 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 4355
95 % 9 14 4398 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.3
PDBFlex
90 % 34 66 269
70 % 34 66 314
50 % 34 66 373
40 % 34 66 391
30 % 60 99 240
Entity #2 | Chains: H
Fab Heavy Chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 70819
95 % 2 3 28500 Flexibility: Medium
Max RMSD: 7.4, Avg RMSD: 5.2
PDBFlex
90 % 2 3 27475
70 % 969 2784 1
50 % 1027 2927 1
40 % 1027 2927 1
30 % 2040 5855 1
Entity #3 | Chains: L
Fab Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68836
95 % 2 3 26769 Flexibility: Medium
Max RMSD: 7.6, Avg RMSD: 5.2
PDBFlex
90 % 2 3 27476
70 % 196 579 7
50 % 1001 2886 2
40 % 1001 2886 2
30 % 2041 5855 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures