6FAB

THREE-DIMENSIONAL STRUCTURE OF MURINE ANTI-P-AZOPHENYLARSONATE FAB 36-71. 1. X-RAY CRYSTALLOGRAPHY, SITE-DIRECTED MUTAGENESIS, AND MODELING OF THE COMPLEX WITH HAPTEN


Sequence Similarity Clusters for the Entities in PDB 6FAB

Entity #1 | Chains: L
IGG1-KAPPA 36-71 FAB (LIGHT CHAIN) protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36844
95 % 2 2 30507 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 13 73 463
70 % 470 2416 2
50 % 582 3067 2
40 % 582 3067 2
30 % 1199 6228 1
Entity #2 | Chains: H
IGG1-KAPPA 36-71 FAB (HEAVY CHAIN) protein, length: 222 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 71938
95 % 2 9 7004 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 2 9 7014
70 % 572 2965 1
50 % 607 3117 1
40 % 607 3117 1
30 % 1200 6228 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2XKN 1 A, C ANTI-EGFR ANTIBODY 7A7 FAB FRAGMENT LIGHT CHAIN (IGG1), RESIDUES 1-223 10090
2 3WII 1 L, M anti-human ROBO1 antibody B2212A Fab light chain 10090
3 4POZ 1 C light chain of Fab fragment of 10B9 antibody 10090
4 3WIH 2 L, M anti-human ROBO1 antibody B2212A Fab light chain 10090
5 4Z8F 2 L S1-15 Fab (IgG2b kappa) light chain 10090
6 3HNT 2 L CS-35 Fab Light Chain Light Chain 10090
7 4Z95 2 L S1-15 Fab (IgG2b) light chain 10090
8 5I30 1 L Fab PL-2 light chain 10090
9 1JFQ 1 L ANTIGEN-BINDING FRAGMENT OF ANTI-PHENYLARSONATE ANTIBODY LIGHT CHAIN 10090
10 1FNS 1 L IMMUNOGLOBULIN NMC-4 IGG1 FAB FRAGMENT, LIGHT CHAIN 10090
11 3HNS 2 L CS-35 Fab Light Chain Light Chain 10090
12 3HNV 2 L CS-35 Fab Light Chain Light Chain 10090
13 6FAB 1 L IGG1-KAPPA 36-71 FAB (LIGHT CHAIN) 10090
14 4ODT 2 L S1-15 Fab (IgG2b kappa) light chain 10090
15 4UIK 2 L FAB 314.1 FAB, LIGHT CHAIN, RESIDUES 1 215 10090
16 1E4W 2 L TAB2 MURINE FAB-FRAGMENT IG KAPPA LIGHT CHAIN 10090
17 1E4X 3 L, M TAB2 MURINE FAB-FRAGMENT IG KAPPA LIGHT CHAIN 10090
18 1EMT 1 L IGG ANTIBODY (LIGHT CHAIN) FAB FRAGMENT 10090
19 1FE8 3 L, M, N IMMUNOGLOBULIN IGG RU5 FAB FRAGMENT LIGHT CHAIN 10090
20 4ODV 1 L A6 Fab (IgG2b kappa) light chain 10090
21 1OAK 1 L NMC-4 IGG1 THE ANTIBODY HEAVY CHAIN CONSISTS OF TWO SEGMENTS, H1 AND H2, BOTH LABELED CHAIN H IN THIS ENTRY FAB FRAGMENT, AN ANTI VON WILLEBRAND FACTOR (VWF) A1 DOMAIN 10090
22 4ODU 1 B, L S1-15 Fab (IgG2b kappa) light chain 10090
23 1IKF 1 L IGG1-KAPPA R45-45-11 FAB (LIGHT CHAIN) 9606
24 4K2U 3 L, M Antibody Light Chain 10090
25 4UIN 2 L FAB 314.3 LIGHT CHAIN, RESIDUES 1-214 10090
26 1MAM 1 L IGG2B-KAPPA YST9.1 FAB (LIGHT CHAIN) 10090
27 5VGA 1 A Fab 36-65 light chain 10090
28 4EDX 2 A, L light chain of FAB of murine anti-NGF 10090
29 3CFD 1 A, L PURPLE-FLUORESCENT ANTIBODY EP2-25C10-KAPPA LIGHT CHAIN FAB 10090
30 3CMO 1 L, X Fab light chain 10090
31 4BH8 1 A ANTI-ARS MURINE GERMLINE MONOCLONAL ANTIBODY 36-65 ANTIGEN BINDING FRAGMENT 10090
32 1FAI 1 L IGG2B-KAPPA R19.9 FAB (LIGHT CHAIN) 10090
33 4ZPT 2 B, L D12 Fab Light chain 10090
34 2F19 1 L IGG2B-KAPPA R19.9 FAB (LIGHT CHAIN) 10090
35 5SZF 1 L 2A10 antibody FAB fragment light chain 9606
36 5DO2 3 D, L 4C2 light chain 10090
37 4PP2 1 A, C light chain of Fab fragment of 10B9 antibody 10090
38 5VCO 1 A, C LIGHT CHAIN OF FAB FRAGMENT OF 10B9 ANTIBODY 10090
39 1GHF 1 L ANTI-ANTI-IDIOTYPE GH1002 FAB FRAGMENT 10090
40 2A6I 1 A Germline antibody 36-65 Fab light chain Fab 10090
41 3RA7 1 L, M Fab fragment, light chain 10090
42 4UIM 2 B, D, F, L FAB 314.3 LIGHT CHAIN, RESIDUES 1-214 10090
43 1FBI 1 L, P IGG1 F9.13.7 FAB (LIGHT CHAIN) 10090
44 2A6J 1 A, L Germline antibody 36-65 Fab light chain Fab 10090
45 4ODW 1 B, L A6 Fab (IgG2b kappa) light chain 10090
46 3CFE 1 A, L PURPLE-FLUORESCENT ANTIBODY EP2-25C10-KAPPA LIGHT CHAIN FAB 10090
47 1R0A 5 L monoclonal antibody (light chain) fab 28 10090
48 4BH7 1 A ANTI-ARS MURINE GERMLINE MONOCLONAL ANTIBODY 36-65 ANTIGEN BINDING FRAGMENT 10090
49 2V7H 1 A, L MONOCLONAL ANTIBODY MONOCLONAL ANTIBODY AGAINST ALPHA-D-MANNOPYRANOSIDE FAB FRAGMENT LIGHT CHAIN 10090
50 2A6D 1 A, L Germline antibody 36-65 Fab light chain Fab 10090
51 5VCN 2 C, E LIGHT CHAIN OF FAB FRAGMENT OF MAB 5H8 10090
52 4PP1 2 C, E light chain of Fab fragment of mAb 5H8 10090
53 5T0Y 1 B, G, L 2A10 FAB fragment light chain 10090
54 6R0X 2 B, D antibody fab fragment light chain 9606
55 2A6K 1 A, L Germline antibody 36-65 Fab light chain Fab 10090
56 4ZPV 2 B, L D12 Fab light chain 10090
57 1N6Q 5 L Monoclonal Antibody (Light Chain) FAB 28 10090
58 2HMI 5 C FAB FRAGMENT OF MONOCLONAL ANTIBODY 28 FAB FRAGMENT 10090
59 3KLH 3 C monoclonal antibody, heavy chain 10090
60 1YNT 1 A, C 4F11E12 Fab variable light chain region Fab fragment 10090
61 1R24 1 A, C PROTEIN (IGG3-KAPPA ANTIBODY (LIGHT CHAIN)) FAB 10090
62 4UIL 2 L FAB 314.1 FAB, LIGHT CHAIN, RESIDUES 1-213 10090
63 1N5Y 5 L monoclonal antibody (light chain) FAB 28 10090
64 1T03 5 L monoclonal antibody light chain Fab light chain domain 10090
65 2ZJS 4 L Fab56 (light chain) 10090
66 1HYS 5 C FAB-28 MONOCLONAL ANTIBODY FRAGMENT LIGHT CHAIN 10090
67 4O02 3 L 17E6 light chain 10090
68 4RAU 1 A, D, G, J, M, P, S, V RTOFab light chain UNP residues 32-101 10090
69 1J5O 5 L ANTIBODY (LIGHT CHAIN) FAB28 10090
70 2VWE 2 C, J ANTI-VEGF-B MONOCLONAL ANTIBODY 10090
71 6NJL 6 J, M 15F1 Fab light chain 10090
72 6NJM 7 K, O 15F1 Fab light chain 10090
73 6NJN 7 J, N 15F1 Fab light chain 10090