Sequence Similarity Clusters for the Entities in PDB 6ES1

Entity #1 | Chains: A
Botulinum neurotoxin type A protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66209
95 % 2 3 25903 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 2 3 25037
70 % 12 18 2756
50 % 12 18 2757
40 % 12 20 2363
30 % 22 59 707
Entity #2 | Chains: B
Synaptic vesicle glycoprotein 2C protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64897
95 % 1 1 47386
90 % 1 1 44911
70 % 2 2 22864
50 % 2 2 20140
40 % 2 2 18395
30 % 2 2 16506

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6ES1 2 B Synaptic vesicle glycoprotein 2C luminal domain 4, UNP residues 474-567 9606