6ECO

Hexamer-2-Foldon HIV-1 capsid platform


Sequence Similarity Clusters for the Entities in PDB 6ECO

Entity #1 | Chains: A
HIV-1 capsid platform protein protein, length: 253 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 87324
95 % 63 83 1
90 % 64 84 1
70 % 64 78 3
50 % 64 78 3
40 % 64 78 3
30 % 64 78 4
Entity #2 | Chains: D
HIV-1 capsid platform protein protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67235
95 % 64 83 1
90 % 65 84 1
70 % 65 78 3
50 % 65 78 3
40 % 65 78 3
30 % 65 78 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures