Sequence Similarity Clusters for the Entities in PDB 6DFL

Entity #1 | Chains: A
Lipopolysaccharide core heptose(I) kinase RfaP protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65653
95 % 1 1 47858
90 % 1 1 45426
70 % 1 1 39967
50 % 1 1 34563
40 % 1 1 31300
30 % 1 1 27626
Entity #2 | Chains: B
Acyl carrier protein protein, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 22 632
95 % 14 26 807 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.0
PDBFlex
90 % 14 26 843
70 % 14 27 865
50 % 19 35 770
40 % 20 42 729
30 % 20 49 704

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures