Sequence Similarity Clusters for the Entities in PDB 6DD9

Entity #1 | Chains: A,B,C,D
Synaptonemal complex protein 3 protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 12021
95 % 1 2 10862 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 2.1
PDBFlex
90 % 1 2 11446
70 % 1 2 10336
50 % 1 2 9573
40 % 1 2 9139
30 % 1 2 8499

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures