Sequence Similarity Clusters for the Entities in PDB 6D28

Entity #1 | Chains: A
Endoplasmin protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 16647
95 % 1 7 12770 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 1 7 12593
70 % 1 7 11979
50 % 1 9 7189
40 % 1 9 6965
30 % 1 9 6542

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6D28 1 A Endoplasmin 9612
2 6CYI 1 A Endoplasmin 9612
3 1QY8 1 A Endoplasmin Residues 69-337 9612
4 1QYE 1 A Endoplasmin Residues 69-337 9612
5 6D1X 1 A Endoplasmin 9612
6 4NH9 1 A Endoplasmin UNP residues 69-337 9606
7 1YT2 1 A Endoplasmin N-terminal Domain of GRP94 Residues (69-337) 9612