Sequence Similarity Clusters for the Entities in PDB 6CNO

Entity #1 | Chains: A,B,C,D
Intermediate conductance calcium-activated potassium channel protein 4 protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6857
95 % 3 3 7671
90 % 3 3 7649
70 % 3 3 7139
50 % 3 3 7035
40 % 3 3 6791
30 % 3 3 6375
Entity #2 | Chains: E,F,G,H
Calmodulin-1 protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 142 182 95
95 % 176 228 75
90 % 183 235 79
70 % 187 240 89
50 % 192 249 105
40 % 250 360 68
30 % 250 361 69

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures