Sequence Similarity Clusters for the Entities in PDB 6C6X

Entity #1 | Chains: A,C,E,H
JC57-14 Heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15095
95 % 1 2 15925 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.4
PDBFlex
90 % 1 2 15658
70 % 522 2928 1
50 % 553 3079 1
40 % 553 3079 1
30 % 1091 6153 1
Entity #2 | Chains: B,D,F,L
JC57-14 Light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15016
95 % 1 2 15807 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.0
PDBFlex
90 % 1 2 15535
70 % 426 2391 2
50 % 531 3030 2
40 % 531 3030 2
30 % 1092 6153 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures