Sequence Similarity Clusters for the Entities in PDB 6C0O

Entity #1 | Chains: A
Reverse transcriptase/ribonuclease H protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 55061
95 % 5 299 111 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.7
PDBFlex
90 % 5 299 117
70 % 5 299 130
50 % 5 300 147
40 % 5 301 163
30 % 5 301 166
Entity #2 | Chains: B
Reverse transcriptase p51 subunit protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 131 207
95 % 5 293 114 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 5 293 120
70 % 5 293 132
50 % 5 294 151
40 % 5 295 167
30 % 5 295 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures