Sequence Similarity Clusters for the Entities in PDB 6BZF

Entity #1 | Chains: A,E
Sporulation-specific protein 16 protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 19556
95 % 1 3 17290 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.5
PDBFlex
90 % 1 3 16993
70 % 1 3 15872
50 % 1 3 14316
40 % 1 3 13297
30 % 1 3 12129
Entity #2 | Chains: B
Protein ZIP2 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 23870
95 % 1 4 17289 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 1 4 18028
70 % 1 4 15871
50 % 1 4 14315
40 % 1 4 14025
30 % 1 4 12128
Entity #3 | Chains: C,G
Sporulation-specific protein 16 protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 19556
95 % 2 3 17290 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.5
PDBFlex
90 % 2 3 16993
70 % 2 3 15872
50 % 2 3 14316
40 % 2 3 13297
30 % 2 3 12129
Entity #4 | Chains: D
Protein ZIP2 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 23870
95 % 2 4 17289 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 4 18028
70 % 2 4 15871
50 % 2 4 14315
40 % 2 4 14025
30 % 2 4 12128
Entity #5 | Chains: F,H
Protein ZIP2 protein, length: 206 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 23870
95 % 3 4 17289 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 3 4 18028
70 % 3 4 15871
50 % 3 4 14315
40 % 3 4 14025
30 % 3 4 12128

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures