Sequence Similarity Clusters for the Entities in PDB 6B6Z

Entity #1 | Chains: A,C
Apo Fab Light Chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21911
95 % 55 220 74 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 2.3
PDBFlex
90 % 237 797 2
70 % 713 2418 2
50 % 904 3071 2
40 % 904 3071 2
30 % 1855 6236 1
Entity #2 | Chains: B,D
Apo Fab Heavy Chain protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29438
95 % 1 2 24591 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 108 339 16
70 % 881 2969 1
50 % 938 3121 1
40 % 938 3121 1
30 % 1856 6236 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures