Sequence Similarity Clusters for the Entities in PDB 6B3K

Entity #1 | Chains: H
Heavy chain of Fab BL3-6 protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 8016
95 % 3 10 6540 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 1.7
PDBFlex
90 % 93 341 16
70 % 791 3009 1
50 % 1655 6281 1
40 % 1655 6281 1
30 % 1670 6327 1
Entity #2 | Chains: L
Light chain of Fab BL3-6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 7 11850
95 % 53 235 67 Flexibility: Low
Max RMSD: 7.7, Avg RMSD: 2.3
PDBFlex
90 % 220 798 2
70 % 636 2439 2
50 % 1656 6281 1
40 % 1656 6281 1
30 % 1671 6327 1
Entity #3 | Chains: R
RNA (83-MER),RNA (83-MER) rna, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures