Sequence Similarity Clusters for the Entities in PDB 5YNY

Entity #1 | Chains: A,B,C,D
Allergen Der f 21 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 14296
95 % 2 2 13898 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 2 2 13731
70 % 2 2 12980
50 % 2 2 11815
40 % 2 5 7788
30 % 2 5 7274

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures